| MPI2007 license: | 13 | Test date: | Aug-2018 |
|---|---|---|---|
| Test sponsor: | Intel Corporation | Hardware Availability: | Aug-2018 |
| Tested by: | Intel Corporation | Software Availability: | Nov-2018 |
| Benchmark | Base | Peak | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Ranks | Seconds | Ratio | Seconds | Ratio | Seconds | Ratio | Ranks | Seconds | Ratio | Seconds | Ratio | Seconds | Ratio | |
| Results appear in the order in which they were run. Bold underlined text indicates a median measurement. | ||||||||||||||
| 104.milc | 80 | 97.9 | 16.0 | 97.2 | 16.1 | 97.0 | 16.1 | |||||||
| 107.leslie3d | 80 | 224 | 23.3 | 216 | 24.2 | 217 | 24.0 | |||||||
| 113.GemsFDTD | 80 | 191 | 33.0 | 190 | 33.3 | 191 | 33.1 | |||||||
| 115.fds4 | 80 | 119 | 16.4 | 120 | 16.3 | 121 | 16.1 | |||||||
| 121.pop2 | 80 | 138 | 29.8 | 139 | 29.7 | 139 | 29.6 | |||||||
| 122.tachyon | 80 | 129 | 21.7 | 129 | 21.7 | 128 | 21.9 | |||||||
| 126.lammps | 80 | 157 | 18.6 | 157 | 18.6 | 157 | 18.6 | |||||||
| 127.wrf2 | 80 | 191 | 40.8 | 190 | 41.0 | 191 | 40.8 | |||||||
| 128.GAPgeofem | 80 | 60.9 | 33.9 | 60.9 | 33.9 | 61.0 | 33.9 | |||||||
| 129.tera_tf | 80 | 119 | 23.3 | 121 | 22.8 | 120 | 23.0 | |||||||
| 130.socorro | 80 | 105 | 36.2 | 105 | 36.3 | 104 | 36.6 | |||||||
| 132.zeusmp2 | 80 | 118 | 26.4 | 118 | 26.4 | 118 | 26.4 | |||||||
| 137.lu | 80 | 112 | 32.9 | 108 | 33.9 | 109 | 33.8 | |||||||
| Hardware Summary | |
|---|---|
| Type of System: | Homogeneous |
| Compute Node: | Intel Server System R2208WFTZS |
| Interconnect: | Intel Omni-Path 100 series |
| File Server Node: | Lustre FS |
| Total Compute Nodes: | 2 |
| Total Chips: | 4 |
| Total Cores: | 80 |
| Total Threads: | 160 |
| Total Memory: | 384 GB |
| Base Ranks Run: | 80 |
| Minimum Peak Ranks: | -- |
| Maximum Peak Ranks: | -- |
| Software Summary | |
|---|---|
| C Compiler: | Intel C++ Composer XE 2018 for Linux Version 18.0.0 Build 20170811 |
| C++ Compiler: | Intel C++ Composer XE 2018 for Linux Version 18.0.0 Build 20170811 |
| Fortran Compiler: | Intel Fortran Composer XE 2018 for Linux Version 18.0.0 Build 20170811 |
| Base Pointers: | 64-bit |
| Peak Pointers: | 64-bit |
| MPI Library: | Intel MPI Library 2019 Build 20180829 |
| Other MPI Info: | libfabric-1.6.1 |
| Pre-processors: | No |
| Other Software: | None |
| Hardware | |
|---|---|
| Number of nodes: | 2 |
| Uses of the node: | Compute |
| Vendor: | Intel |
| Model: | Intel Server System R2208WFTZS |
| CPU Name: | Intel Xeon Gold 6148 |
| CPU(s) orderable: | 1-2 chips |
| Chips enabled: | 2 |
| Cores enabled: | 40 |
| Cores per chip: | 20 |
| Threads per core: | 2 |
| CPU Characteristics: | Intel Turbo Boost Technology up to 3.7 GHz |
| CPU MHz: | 2400 |
| Primary Cache: | 32 KB I + 32 KB D on chip per core |
| Secondary Cache: | 1 MB I+D on chip per core |
| L3 Cache: | 27.5 MB I+D on chip per chip |
| Other Cache: | None |
| Memory: | 192 GB (16 x 12 GB 2Rx4 DDR4-2666) |
| Disk Subsystem: | ATA INTEL SSDSC2BA80 |
| Other Hardware: | None |
| Adapter: | Intel Omni-Path Edge Switch 100 series |
| Number of Adapters: | 1 |
| Slot Type: | PCI-Express x16 |
| Data Rate: | 12.5 GB/s |
| Ports Used: | 1 |
| Interconnect Type: | Intel Omni-Path Fabric 100 series |
| Software | |
|---|---|
| Adapter: | Intel Omni-Path Edge Switch 100 series |
| Adapter Driver: | IFS 10.7 |
| Adapter Firmware: | 1.26.1 |
| Operating System: | Oracle Linux Server release 7.4 |
| Local File System: | Linux/xfs |
| Shared File System: | Lustre FS |
| System State: | Multi-User |
| Other Software: | IBM Platform LSF Standard 9.1.1.1 |
| Hardware | |
|---|---|
| Number of nodes: | 11 |
| Uses of the node: | Fileserver |
| Vendor: | Intel |
| Model: | Intel Server System R2208GZ4GC4 |
| CPU Name: | Intel Xeon E5-2680 |
| CPU(s) orderable: | 1-2 chips |
| Chips enabled: | 2 |
| Cores enabled: | 16 |
| Cores per chip: | 8 |
| Threads per core: | 2 |
| CPU Characteristics: | Intel Turbo Boost Technology up to 3.5 GHz |
| CPU MHz: | 2700 |
| Primary Cache: | 32 KB I + 32 KB D on chip per core |
| Secondary Cache: | 2 MB I+D on chip per chip |
| L3 Cache: | None |
| Other Cache: | None |
| Memory: | 64 GB per node (8 x 8 GB 1600MHz Reg ECC DDR3) |
| Disk Subsystem: | 136 TB 3 RAID with 8 SAS/SATA |
| Other Hardware: | None |
| Adapter: | Intel Omni-Path Fabric Adapter 100 series |
| Number of Adapters: | 1 |
| Slot Type: | PCI-Express x16 |
| Data Rate: | 12.5 GB/s |
| Ports Used: | 1 |
| Interconnect Type: | Intel Omni-Path Fabric 100 series |
| Software | |
|---|---|
| Adapter: | Intel Omni-Path Fabric Adapter 100 series |
| Adapter Driver: | IFS 10.7 |
| Adapter Firmware: | 1.26.1 |
| Operating System: | Redhat Enterprise Linux Server Release 7.4 |
| Local File System: | None |
| Shared File System: | Lustre FS |
| System State: | Multi-User |
| Other Software: | None |
| Hardware | |
|---|---|
| Vendor: | Intel |
| Model: | Intel Omni-Path Fabric 100 series |
| Switch Model: | Intel Omni-Path Edge Switch 100 series |
| Number of Switches: | 24 |
| Number of Ports: | 48 |
| Data Rate: | 12.5 GB/s |
| Firmware: | 1.26.1 |
| Topology: | Fat tree |
| Primary Use: | MPI and I/O traffic |
The config file option 'submit' was used.
130.socorro (base): "nullify_ptrs" src.alt was used.
129.tera_tf (base): "add_rank_support" src.alt was used.
143.dleslie (base): "integer_overflow" src.alt was used.
MPI startup command:
mpiexec.hydra command was used to start MPI jobs.
export I_MPI_FABRICS=shm:ofi
export FI_PSM2_INJECT_SIZE=8192
export I_MPI_PIN_DOMAIN=core
export I_MPI_PIN_ORDER=bunch
export FI_PSM2_DELAY=0
export FI_PSM2_LAZY_CONN=1
export I_MPI_COMPATIBILITY=3
Spectre & Meltdown:
Kernel: 3.10.0-862.11.6.el7.crt1.x86_64
Microcode: 0x200004d
l1tf: Mitigation: PTE Inversion
meltdown: Mitigation: PTI
spec_store_bypass: Mitigation: Speculative Store Bypass disabled via prctl and seccomp
spectre_v1: Mitigation: Load fences, __user pointer sanitization
spectre_v2: Mitigation: IBRS (kernel)
BIOS settings:
Intel Hyper-Threading Technology (SMT) = Enabled (default is Enabled)
Intel Turbo Boost Technology (Turbo) = Enabled (default is Enabled)
RAM configuration:
Compute nodes have 2x16-GB RDIMM on each memory channel.
Network:
Endeavour Omni-Path Fabric consists of 48-port switches = 24 core switches
connected to each leaf of the rack switch.
HFI driver parameters:
cache_size = 1024
rcvhdrcnt = 4096
Job placement:
Each MPI job was assigned to a topologically compact set of nodes, i.e.
the minimal needed number of leaf switches was used for each job = 1 switch
for 40/80/160/320/640 ranks, 2 switches for 1280 and 1980 ranks.
IBM Platform LSF was used for job submission. It has no impact on performance.
Information can be found at: http://www.ibm.com
| mpiicc |
| 126.lammps: | mpiicpc |
| mpiifort |
| mpiicc mpiifort |
| 121.pop2: | -DSPEC_MPI_CASE_FLAG |
| 126.lammps: | -DMPICH_IGNORE_CXX_SEEK |
| 127.wrf2: | -DSPEC_MPI_CASE_FLAG -DSPEC_MPI_LINUX |
| 130.socorro: | -assume nostd_intent_in |